Team I Genome Assembly Group: Difference between revisions
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'''Figure 1'''. ''Klebsiella'' (http://healthcare.bioquell.com) | '''Figure 1'''. ''Klebsiella'' (http://healthcare.bioquell.com) | ||
''Features of Klebsiella: '' | |||
''a) Gram negative, non-motile, straight rods, Capsule forming;'' | |||
''b) Singly, in pairs or short chains;'' | |||
''c) Both respiratory and fermentative metabolism, facultative (metablolism switching based on environment)'' | |||
''d) Oxidase negative'' | |||
===Data=== | ===Data=== | ||
Revision as of 09:05, 27 February 2018
The group is conducting its discussions, planning, etc. on the Open Academic Environment. Our group is public.
Introduction
Background
Figure 1. Klebsiella (http://healthcare.bioquell.com)
Features of Klebsiella: a) Gram negative, non-motile, straight rods, Capsule forming; b) Singly, in pairs or short chains; c) Both respiratory and fermentative metabolism, facultative (metablolism switching based on environment) d) Oxidase negative
Data
Objective
Methods
Pipeline
Pre-processing
Assembly
Algorithms
Burrows–Wheeler Transform(BWT)
De Bruijn graph
Discussion
Conclusions
References
1. Bergey, David Hendricks, Robert Stanley Breed, Everitt George Dunne Murray, and A. Parker Hitchens. Bergey's manual of determinative bacteriology. Baltimore: Williams & Wilkins, 1934.